Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840337.1_cds_XP_016507602.1_20708
CDS Infomation

[gene=LOC107825282] [db_xref=GeneID:107825282] [protein=ubiquitin domain-containing protein DSK2-like] [protein_id=XP_016507602.1] [location=complement(join(78269..78277,83763..83840,83981..84264,84801..84924,85010..85075,85148..85315,85422..85567,85643..85712,85910..85944,86342..86422,86654..86771,86992..87108))] [gbkey=CDS]
Sequence

ATGACTCGCACTGGTGAAACTTCTGAGGGCCATGAATCTGAAGGTATTGATACGACGATT
GAGATAAAAGTAAAAACTATGAATTCTCAAACCCACAATTTGCGCATTGGCAGTCAGAGG
AAAGTATGGAACTTGAAAGAACAGGTGTCTCTTTTGATAGGGACGCCAATGGAACAACAG
CGTCTAATCTATTGTGGAAAAGTCTTACAGGATGATGACCTCCTTTCTTCATACAATATT
GAAAGTGGTGATACTTTGCATCTGATTTGCACCGTCCAGAGCATGTCAACCTTTGGTAAT
TCACCCTGTTGCCCAGGTGCTACTGATAGGATTTCTCCCAATACTCAACAGGAAATCCCT
AACTCTATAGAAACTTTGTCACGATATCTCAACCGAATGAGACGAGGATATAATATAAAC
GGAACAGAAAACAATACGAATGAGGTACTCGGAAGTGCATCCAATACTTTCACTCCTTCA
CAAGGAATTCCAGAAGTAGAACAATTAGCAAGACTGCTGTCTTCCACTAGGGATATGCTT
ATTAGCCAAACTGCACAGCGCTTTCTTGAATTGGAAAGGGATCTGCGGCAAAATCTGAAC
ATGAGTGATCCGAGGGTGCGCCAGGGAACCCAGTTAAATGCACAGACAACAGTCGGAACA
GTGTTTAACAATCTAGGCGCATATTTTCTTGAACTTGGCCGCACAATGATGGGGGTCCGA
ATGGGTGACAATGGGAGTACTGCCGTAGTTAATGCTGGCCCTGCAGTCTATATAACCGAC
TCGGGACCACTGTCCATCCAGGAAGAACTTTATTCTGTGCTGCTCTCAACAATACACAGG
CTGATCAACTCTGGTTTAGTAAATGATAATGGTACGCGGCTGCACCAGAGGCAAGTTGGT
ACACAAATGATAGGAGGTTCGTTAGGAAGACAAGCACCCAATATGCTACGAGTCAGATAC
ACTAGATACTTTCTTAGACCCATAGTTGCCACAGCTGATCAAACTGAAGCTCAAATACTG
CCACCAGGAAGTGGCGTACCAACGGAAGTTAGCCAACTTTTGAGAAGTATGTTCCTCAGT
GGTGAACTTCAAGCTGCTACACCTGCAGGTGCAACTGTTGATAACGTTGTTGACAACTCA
AGGATATTAGGTCTATCTTCTGGACCATCAATTATAGAACCAAGAAATGCTCGTGAATCA
GCTGGTGAACCTGCTAATGAAGATGTTGGGACATCTCATCGACGAACAGCTGATTTTGCT
GAAAGCTCATCAACAAAACGACAAAGGATGGAGTGA

Peptide Sequence

PEP ID

XP_016507602.1
PEP Infomation

PREDICTED: ubiquitin domain-containing protein DSK2-like [Nicotiana tabacum]
Sequence

MTRTGETSEGHESEGIDTTIEIKVKTMNSQTHNLRIGSQRKVWNLKEQVSLLIGTPMEQQ
RLIYCGKVLQDDDLLSSYNIESGDTLHLICTVQSMSTFGNSPCCPGATDRISPNTQQEIP
NSIETLSRYLNRMRRGYNINGTENNTNEVLGSASNTFTPSQGIPEVEQLARLLSSTRDML
ISQTAQRFLELERDLRQNLNMSDPRVRQGTQLNAQTTVGTVFNNLGAYFLELGRTMMGVR
MGDNGSTAVVNAGPAVYITDSGPLSIQEELYSVLLSTIHRLINSGLVNDNGTRLHQRQVG
TQMIGGSLGRQAPNMLRVRYTRYFLRPIVATADQTEAQILPPGSGVPTEVSQLLRSMFLS
GELQAATPAGATVDNVVDNSRILGLSSGPSIIEPRNARESAGEPANEDVGTSHRRTADFA
ESSSTKRQRME

Transcript Sequence

Gene sequence data has not been registered.